Strain Profile · NCBI Strain Taxon 83333
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Escherichia coli K-12

DEP K-12
◔ Human-origin
Sequenced
Public genome assembly available

Escherichia coli K-12 is a well-studied non-pathogenic laboratory strain of E. coli widely used in molecular biology, genetics, and fermentation research since the 1940s. The indexed research reflects its role as a model organism — covering motility regulation, gene mapping, competitive colonization in mouse intestines, and fermentation acid tolerance — rather than probiotic application. One regulatory review noted that certain K-12 derivatives are approved for producing human milk oligosaccharides (e.g., 3-fucosyllactose) as novel food ingredients, and historical vaccine research used K-12 hybrid constructs. K-12 itself is not a commercial probiotic strain, though some E. coli-derived preparations (such as Nissle 1917) with distinct designations have established probiotic evidence bases.

Where it's been studied

Share of this strain's 270 body-system-tagged papers that concern each system. Research coverage, not measured effect.

+2 more systems

Symptoms in the research

Share of this strain's 89 symptom-tagged papers that mention each symptom or condition. Research coverage, not evidence of benefit.

+4 more symptoms

Research

848 papers reference this strain in the probiotic database.

Match confidence
IN_VITRO
Improvement of organic solvent tolerance in Escherichia coli by gene mutations
· Institutional Repositories DataBase (IRDB)
IN_VITRO
Disruptions in outer membrane-peptidoglycan interactions enhance bile salt resistance in O-antigen-producing E. coli
· Newcastle University ePrints (Newcastle Univesity)
2026 ANIMAL
Gut-relevant short-chain fatty acids modulate host-pathogen dynamics of uropathogenic Escherichia coli at the colonic epithelial interface
· bioRxiv (Cold Spring Harbor Laboratory)
2026 IN_VITRO
Combining evolutionary steering and Coevolutionary Phage training to generate predictable phage-antibiotic synergy
· eScholarship (California Digital Library)
2026 ANIMAL
The functional plasticity of the YhdWXYZ ABC transporter enables antibiotic homeostasis and host colonisation in enteric bacteria
· bioRxiv (Cold Spring Harbor Laboratory)
2026 ANIMAL
Abstract 4904: Reprogramming of the non-pathogenic E. coli surface architecture to create next-generation immune engagers for potent cancer therapies
· Cancer Research
2026 IN_VITRO
Effects of Hexuronic Acids on the Expression of Genes for Structural Flagellar Proteins and Regulators of Biofilm Formation in Escherichia coli K-12 MG1655
· Molecular Biology
2025 ANIMAL
LIME: A first-in-class of live bacterial immune engagers for cancer immunotherapy
· Blood
2025 ANIMAL
Human body temperature cues widespread changes in virulence gene expression in uropathogenic Escherichia coli
· Infection and Immunity
2025 ANIMAL
O‑Island 28 encodes a type I secretion and RTX adhesion system regulated by RstA and required for early EHEC O157:H7 adherence
· Gut Microbes
2025 IN_VITRO
LPS O-antigen polysaccharide length impacts outer membrane permeability of enteric gram-negative bacteria
· mBio
2024 IN_VITRO
Type 1 fimbriae-mediated collective protection against type 6 secretion system attacks
· mBio
2024 ANIMAL
Genetic mutation in Escherichia coli genome during adaptation to the murine intestine is optimized for the host diet
· mSystems
2024 WGS
Comparative genome analysis of three classical E. coli cloning strains designed for blue/white selection: JM83, JM109 and XL1‐Blue
· FEBS Open Bio
2024 IN_VITRO
Discovery of a Gut Bacterial Metabolic Pathway that Drives α-Synuclein Aggregation
· ACS Chemical Biology
2024 IN_VITRO
Class IIb Microcin MccM Interferes with Oxidative Phosphorylation in Escherichia coli
· ACS Chemical Biology
2024 IN_VITRO
Genome-Scale Investigation of the Regulation of azoR Expression in Escherichia coli Using Computational Analysis and Transposon Mutagenesis
· Microbial Ecology
2023 OTHER
Construction of an Escherichia coli Strain Capable of Utilizing Steamed Rice as the Sole Carbon and Energy Source by Extracellular Expression of Amylase and Its Use for the Production of Putrescine
· Applied Microbiology
2023 IN_VITRO
Fitness Tradeoffs of Multidrug Efflux Pumps in Escherichia coli K-12 in Acid or Base, and with Aromatic Phytochemicals
· bioRxiv (Cold Spring Harbor Laboratory)
2023 IN_VITRO
Ribosome profiling reveals the fine-tuned response of Escherichia coli to mild and severe acid stress
· mSystems
Browse all 848 papers →

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